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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10106250 chr8:11581846 A/G KIAA1967 chr8:22462257-22477981:+ 0.7 7.84 4.61E-14 Box Plot
BLCA rs10106250 chr8:11581846 A/G LEPROTL1 chr8:29952914-30034724:+ 0.74 8.03 1.19E-14 Box Plot
BLCA rs10106250 chr8:11581846 A/G LONRF1 chr8:12579403-12613582:- 0.5 6.19 1.59E-9 Box Plot
BLCA rs10106250 chr8:11581846 A/G MCPH1 chr8:6264113-6506025:+ 0.76 8.46 5.69E-16 Box Plot
BLCA rs10106250 chr8:11581846 A/G NUDT18 chr8:21964383-21966932:- 0.54 6.59 1.42E-10 Box Plot
BLCA rs10106250 chr8:11581846 A/G PCM1 chr8:17780349-17887453:+ 0.61 7.39 9.17E-13 Box Plot
BLCA rs10106250 chr8:11581846 A/G POLR3D chr8:22102617-22112113:+ 0.58 6.7 7.69E-11 Box Plot
BLCA rs10106250 chr8:11581846 A/G PPP2CB chr8:30631973-30671830:- 0.52 6.24 1.16E-9 Box Plot
BLCA rs10106250 chr8:11581846 A/G PPP2R2A chr8:26149007-26230196:+ 0.6 7.04 8.77E-12 Box Plot
BLCA rs10106250 chr8:11581846 A/G R3HCC1 chr8:23127633-23153792:+ 0.58 7.09 6.54E-12 Box Plot
BLCA rs10106250 chr8:11581846 A/G REEP4 chr8:21995533-21999464:- 0.5 6.13 2.15E-9 Box Plot
BLCA rs10106250 chr8:11581846 A/G RPL23AP53 chr8:163186-182231:- 0.6 6.67 9.17E-11 Box Plot
BLCA rs10106250 chr8:11581846 A/G TMEM66 chr8:29920528-29939940:- 0.59 7.38 9.74E-13 Box Plot
BLCA rs10106250 chr8:11581846 A/G TNFRSF10B chr8:22877646-22926692:- 0.48 6 4.52E-9 Box Plot
BLCA rs10106250 chr8:11581846 A/G TNKS chr8:9413424-9639856:+ 0.7 9.92 8.45E-21 Box Plot